If you would like to use the MrvCell in KNIME, you have to install the Marvin Extensions into your Eclipse. The Marvin Extensions can be downloaded from http://www.knime.org/downloads/update
Then, you can generate the MrvCell by the following method.
public static DataCell jp.co.infocom.cheminfo.marvin.type.MrvCellFactory#create(chemaxon.struc.Molecule mol) public static DataCell jp.co.infocom.cheminfo.marvin.type.MrvCellFactory#create(java.lang.String mol)
In case of String argument, the String must represent Mrv format. Also, you can use the MrvCellFactory.TYPE to determine the DataType of a DataCell.
NOTE: The MrvCell automatically clears their properties to reduce their data usage. Instead, I always extract their properties to other columns before generating MrvCell.
I am sorry for my poor explanation. You have to add "jp.co.infocom.cheminfo.marvin" plugin into "Required Plug-ins" on "Dependencies". Also, if you would like to use ChemAxon libraries, add "jp.co.infocom.cheminfo.jchemlib" plugin as well.
I'm sorry, I am not sure I am following. I am using Eclipse SDK 3.6.1 (that came with Knime). Are you suggesting to add some jar file to the dependencies of the project? Where do I find "Required Plug-ins"? When I right-click on "Plug-in Dependencies" in my project, I can only import/export jars...
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