screening / similarity searches from PHP

I have received a response regarding the licensing from your team, though I still have one question (likely of interest to other users as well):

Is there a way to preform screening / similarity searches from PHP (via Axis2 / SOAP) - or must this be done through the JSP or .NET APIs?

I moved to this forum, they can help but I am sure you can do this

Cheers/Alex

OPeters,

You can use JChem Web Services to call our JChem suite of tools including running structure and similarity searches.  JChem Web Services provide a SOAP interface for many web services compatible programming languages including PHP. The JChem Search Web Service would probably be most useful for you. 

 

JChem Web Services Product Page:

http://www.chemaxon.com/products/jchem-web-services/

JChem Web Services Developers Guide:

http://www.chemaxon.com/webservices/developersGuide.html

PHP specific developers guide:

http://www.chemaxon.com/webservices/php/index.html

 

Jonathan Lee

Hi,

Just wanted to know if I can get simple code for substructure search
in PHP?....I did lot of efforts and posted my problem in lot of forms
..but i am not getting any help.

Is there any one who can help me
in sub structural search. i am developing my application in PHP. And i
am using Smiles for search, but not getting the accurate results....plz
help

I dont want to buy Jchem web services as i am developing my own web interface...i am gtng stucked at search ......plz

@Seerat:

Seerat wrote:

Hi, Just wanted to know if I can get simple code for substructure search in PHP?....I did lot of efforts and posted my problem in lot of forms ..but i am not getting any help. Is there any one who can help me in sub structural search. i am developing my application in PHP. And i am using Smiles for search, but not getting the accurate results....plz help I dont want to buy Jchem web services as i am developing my own web interface...i am gtng stucked at search ......plz

Hi Seerat,

   Could you be more specific? Do you want to use jchem from a PHP application?

 

Seerat wrote:

Hi, Just wanted to know if I can get simple code for substructure search in PHP?....I did lot of efforts and posted my problem in lot of forms ..but i am not getting any help. Is there any one who can help me in sub structural search. i am developing my application in PHP. And i am using Smiles for search, but not getting the accurate results....plz help I dont want to buy Jchem web services as i am developing my own web interface...i am gtng stucked at search ......plz

OPeters wrote:

@Seerat: I had a lot of trouble getting JChem Web Services to work as well; mostly because I found the SOAP interface to be poorly documented (examples would help very much).

Hi OPeters,

   The webservcies package contains several examples for each programming language (PHP, C++, etc.) Please, let us know what do you miss from the documetation exactly?

Hi OPeters,

 

I am aslo doing sub structural search in PHP...using Jcsearch

In command line i am getint the result , but when i am using the same command in PHP through exec or system command as show below

system('"C:\Program Files\ChemAxon\JChem\bin\jcsearch" -q "c1ccoc1" -f  sdf C:\Xampp\htdocs\temp\441mcd.sdf" >"C:\Xampp\htdocs\temp\output.sdf"' );

i am not getting any output.....

plz tell what to do den....i think i have to modify my httpd.conf file..but dont know how..plz help

 

And one thing more....from jcsearch we will get the op in file...den wat to do get o/pdirectly from database.

plz reply fast ...it is urgent

 

Hi Seerat,

   Is the command "C:\Program Files\ChemAxon\JChem\bin\jcsearch" -q "c1ccoc1" -f  sdf C:\Xampp\htdocs\temp\441mcd.sdf" >"C:\Xampp\htdocs\temp\output.sdf" works from the command line?

• If no, please send us a detailed problem report


• If yes, then it is a php programming problem and you can post your problem to php support forums. e.g.: http://stackoverflow.com/questions/2414647/calling-php-from-php-through-exec-gives-no-result