structure to name and Acyl-CoA derivatives

hi all,

 

I am using chemaxon IUPAC name generator to study biological molecules. I would like to name acyl-Coa dérivatives without full detail of the Co-enzyme A structure.

For example, methylpropanoyl-Coa instead of

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{[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-({[hydroxy({[hydroxy(3-hydroxy-2,2-dimethyl-3-{[2-({2-[(2-methylpropanoyl)sulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}propoxy)phosphoryl]oxy})phosphoryl]oxy}methyl)oxolan-3-

yl]oxy}phosphonic acid

 

 

Does anyone knows a simple solution for this problem ?

 

Thank you

Hi Guillaume,

 

The naming of CoA is not supported yet. I'm opening a task for it.

 

Until then, you should be able to get the names you want by removing the CoA and replacing it with a radical. This is of course not so practical, only a workaround.

 

Do you typically have the CoA group expanded, or as a "superatom" group? Could you attach an example structure in mrv/mol/sd format?

 

Best regards,

 

Daniel Bonniot