setting cis and trans

Hi. I would like to ask one question.

Please see the attached file. After running this reaction, as you can see, I got the pruduct of trans structure but cis is the right one in this reaction. So I wonder if there is a function to set trans and cis structure.

Please let me know.

Thanks a lot for your help in advance.

 

Product [1/12] seems to be correct. Please attach the expected product.

Thank you for your quick answer and sorry for my mistake. You are right.  the product is cis so it is right.

So now it is not a problem but I wonder how I can set trans and cis. For muconic acid,  there are three forms possible, trans, cis-, cis, cis-, and trans, trans- .Could you please let me know ?

You can read about the possible solutions for setting double bond stereo information in Reactor in our documentation: 

http://www.chemaxon.com/jchem/doc/user/reactor_glossary.html#mapping

http://www.chemaxon.com/jchem/doc/user/reactor_glossary.html#cistrans

Thank you for your kind answer.

I see. it is possible by mapping.

Thank you so much.

 

Thanks for those links vpalfi. They were just what I was looking for to answer my questions.