jcman import: ArrayIndexOutOfBoundsException: 238

I get the following exception when using jcman 3.0.10 to import the attached reaction. The reaction without the "NOT list" atom will import fine.





Collecting file information ...


Done.


Importing structures from 0284_test.mrv ...


Error in molecule 1


java.lang.ArrayIndexOutOfBoundsException: 238


at chemaxon.sss.screen.HashCode.calcHashCode(HashCode.java:153)


at chemaxon.sss.screen.HashCode.getHashCode(HashCode.java:58)


at chemaxon.sss.screen.HashCode.getHashCode(HashCode.java:97)


at chemaxon.sss.screen.HashCode.getHashCode(HashCode.java:84)


at chemaxon.jchem.db.UpdateHandler.init(UpdateHandler.java:764)


at chemaxon.jchem.db.UpdateHandler.execute(UpdateHandler.java:1378)


at chemaxon.jchem.db.FileToSQLHandler.importFile(FileToSQLHandler.java:263)


at chemaxon.jchem.db.Importer.importMols(Importer.java:423)


at chemaxon.jchem.Command.importFromFile(Command.java:717)


at chemaxon.jchem.Command.main(Command.java:413)


Imported 0 structures


Done.

Hi,





Currently JChem tables only support specific (non-query) structures and reactions.





We plan to support query structures in the future.





Best regards,





Szilard

So, if I'm storing reactions in the database just for the purpose of storing them (not searching them, etc.), I should use a normal database table (not a JChem table)?





Also, do you have a time frame for supporting query structures?

Hi,





Yes, I recommend storing them in a plain (non-JChem) table.





We plan to support query tables from version 3.2, which is at least 4-5 months away (there's no specific deadline yet for this version).





Best regards,





Szilard