deprecated SearchOptions and what's new ...

Hi, i am using following to instantiate the MolSearch obj, but some of these are marked as depreacted. I am using JChem 5.11.4 library. What is the contemporary method to replace this,

Thanks

Dong

MolSearch mss = new MolSearch();
final MolSearchOptions msp = new MolSearchOptions();
msp.setSearchType(SearchOptions.SUBSTRUCTURE);
mss.setSearchOptions(msp);
mss.setQuery("[NR][CR](=O)[CR]");
mss.setTarget(molecule);

I have moved your question to the proper topic group. Jcb team will answer you soon.

Hi Dong,

You should specify the search type in the constructor of the search options object, i.e. the 2nd and 3rd lines should be replaced with:

final MolSearchOptions msp = new MolSearchOptions(SearchOptions.SUBSTRUCTURE);

Regards,
Peter