Chemical Terms error in 2.4.3

User e05b1833aa

14-03-2009 15:15:58

Hi,





I just upgraded to 2.4.3 on Windows. As soon as I try to add a new Chemical Term field I get the following error:





A java.lang.NoClassDefFoundError exception has occurred.


    Click Show Details or see the messages.log file located in your C:\Users\evehom\AppData\Roaming\.instantjchem\ijc_2_4\var\log folder.





Any clues?

ChemAxon fa971619eb

14-03-2009 15:42:32

Can you please send the version information.


Help -> About Instant JChem


and then copy the version information and paste it into this forum topic.


Thanks





Tim

ChemAxon fa971619eb

14-03-2009 15:58:52

Also, if there is any more information given (e.g. which class is not found) then can you provide that too.


You may need to look in the log file to find this.


View -> Instant JChem Log File.





Thanks


Tim

User e05b1833aa

14-03-2009 17:56:34

Hi,





Here's the 'About' info:





Instant JChem Version: 2.4.3 (build: 090312)


JChem Version: 5.1.3_2


JChem Table Version: 50103


Marvin Version: 5.1.3_2 (build date: 2008-11-13)


Java: 1.6.0_05; Java HotSpot(TM) Client VM 10.0-b19


System: Windows Vista version 6.0 running on x86; Cp1252; sv_SE (instantjchem)


NetBeans build: 200711261600


Userdir: C:\Users\evehom\AppData\Roaming\.instantjchem\ijc_2_4


Java Web Start: No


Plugins:


    chemaxon.ijc.updatecenter [2.4.3 090312]


    chemaxon.jchem/1 [5.2 090312]


    com.im.commons/1 [2.4 081118]


    com.im.df.api/1 [2.4.3 090312]


    com.im.df.core.derby/1 [2.4.3 090312]


    com.im.df.core.oracle/1 [2.4.3 090312]


    com.im.df.db.mysql/1 [2.4.3 090312]


    com.im.df.localdb/1 [2.4 081118]


    com.im.df.server.local/1 [2.4 081118]


    com.im.df/1 [2.4.3 090312]


    com.im.ijc.autoupdate/1 [2.4 081118]


    com.im.ijc.branding/1 [2.4.3 090312]


    com.im.ijc.chem.overlap/1 [2.4 081118]


    com.im.ijc.core/1 [2.4.3 090312]


    com.im.ijc.examples.addfield [2.4 081118]


    com.im.ijc.examples.ijcrenderers [2.4 081118]


    com.im.ijc.examples.mathcomputationactions [2.4 081118]


    com.im.ijc.extraloaders [2.4 081118]


    com.im.ijc.formview/1 [2.4.2 090213]


    com.im.ijc.gridview/1 [2.4.1 090213]


    com.im.ijc.io [2.4.2 090213]


    com.im.ijc.jrprinting/1 [2.4.3 090312]


    com.im.ijc.project/1 [2.4.3 090312]


    com.im.ijc.querytextpanel [2.4 081118]


    com.im.ijc.renderers/1 [2.4.3 090312]


    com.im.ijc.security/1 [2.4 081118]


    com.im.ijc.server.api/1 [2.4 081118]


    com.im.ijc.server.impl/1 [2.4.3 090312]


    com.im.ijc.sfs [2.4.2 090213]


    com.im.ijc.standardizer/1 [2.4 081118]


    com.im.ijc.structurefiles/1 [2.4 081118]


    com.im.ijc.update.pack [2.4.3 090312]


    com.im.ijc.versionprovider [2.4.3 090312]


    com.im.ijc.welcome/1 [2.4.2 090213]


    com.im.ijc.widgets/1 [2.4.2 090213]


    com.jacob.com [1.0 081118]


    com.lowagie.iia/1 [2.0.8 081118]


    com.michaelbaranov.microba/1 [0.4.4 081118]


    com.mysql.jdbc/1 [5.0.8 081118]


    net.sf.cglib/1 [2.1.3 081118]


    net.sf.jasperreports/1 [3.0.1 081118]


    oracle.jdbc/1 [11.1.0.6.0 081118]


    org.acegisecurity/1 [1.0.5 081118]


    org.apache.batik/1 [1.1 081118]


    org.apache.commons.beanutils/1 [1.7.0 081118]


    org.apache.commons.collections/1 [3.2 081118]


    org.apache.commons.dbcp/1 [1.2.2 081118]


    org.apache.commons.digester/1 [1.8 081118]


    org.apache.commons.pool/1 [1.3 081118]


    org.apache.derby/1 [10.4.2 081118]


    org.apache.poi [3.0.1 081118]


    org.apache.xml.resolver [1.2.1 1.2 200711261600]


    org.dom4j/1 [1.6.1 090213]


    org.eclipse.jdt.core.compiler/1 [3.1.1 081118]


    org.freehep/1 [2.1.1 081118]


    org.jdesktop.layout/1 [1.4.1 1.0.3 200711261600]


    org.netbeans.api.progress/1 [1.10.1.1 1 200711261600]


    org.netbeans.api.visual [2.9.1 200711261600]


    org.netbeans.api.xml/1 [1.14.1 200711261600]


    org.netbeans.bootstrap/1 [2.7.1 200711261600]


    org.netbeans.core.execution/1 [1.10.1.1 200711261600]


    org.netbeans.core.ide/1 [1.10.1 200711261600]


    org.netbeans.core.output2/1 [1.8.2.1 1 200711261600]


    org.netbeans.core.startup/1 [1.10.1.1 200711261600]


    org.netbeans.core.ui/1 [1.10.1 200711261600]


    org.netbeans.core.windows/2 [2.8.1.1 200711261600]


    org.netbeans.core/2 [3.6.1.0.1.1 081105]


    org.netbeans.libs.commons_logging/1 [1.4.1 1.0.4 200711261600]


    org.netbeans.libs.xerces/1 [1.10.1 2.8.0 200711261600]


    org.netbeans.modules.applemenu/1 [1.7.1 200711261600]


    org.netbeans.modules.autoupdate.services [1.3.1.0.1 080214]


    org.netbeans.modules.autoupdate.ui [1.2.1 200711261600]


    org.netbeans.modules.classfile/1 [1.19.1 200711261600]


    org.netbeans.modules.db.core [1.5.1 200711261600]


    org.netbeans.modules.db.sql.editor [1.5.1.5 200711261600]


    org.netbeans.modules.db.sql.visualeditor/1 [2.1.1.5 200711261600]


    org.netbeans.modules.db/1 [1.24.1.5 5 200711261600]


    org.netbeans.modules.dbapi [1.5.1.5 200711261600]


    org.netbeans.modules.defaults/1 [1.3.1 200711261600]


    org.netbeans.modules.editor.bookmarks/1 [1.4.1 200711261600]


    org.netbeans.modules.editor.bracesmatching/0 [1.3.1 200711261600]


    org.netbeans.modules.editor.codetemplates/1 [1.5.1.1.5 1 200711261600]


    org.netbeans.modules.editor.completion/1 [1.9.1 200711261600]


    org.netbeans.modules.editor.errorstripe.api/1 [2.3.1.1 1 200711261600]


    org.netbeans.modules.editor.errorstripe/2 [2.3.1.1.1 1 200711261600]


    org.netbeans.modules.editor.fold/1 [1.6.1 200711261600]


    org.netbeans.modules.editor.guards/1 [1.0.1 200711261600]


    org.netbeans.modules.editor.highlights/0 [1.2.1.1 1 200711261600]


    org.netbeans.modules.editor.indent/2 [1.6.1.4 200711261600]


    org.netbeans.modules.editor.lib/1 [1.20.1.4.2 4 200711261600]


    org.netbeans.modules.editor.lib2/1 [1.5.1.2 2 200711261600]


    org.netbeans.modules.editor.mimelookup.impl/1 [1.1.1 200711261600]


    org.netbeans.modules.editor.mimelookup/1 [1.8.1 200711261600]


    org.netbeans.modules.editor.plain.lib/1 [1.4.1 200711261600]


    org.netbeans.modules.editor.plain/1 [1.4.1 200711261600]


    org.netbeans.modules.editor.settings.storage/1 [1.10.1 200711261600]


    org.netbeans.modules.editor.settings/1 [1.12.1 200711261600]


    org.netbeans.modules.editor.structure/1 [1.15.1.1 1 200711261600]


    org.netbeans.modules.editor.util/1 [1.21.1 200711261600]


    org.netbeans.modules.editor/3 [1.35.1.4.2 200711261600]


    org.netbeans.modules.extbrowser/1 [1.11.1 200711261600]


    org.netbeans.modules.favorites/1 [1.12.1 200711261600]


    org.netbeans.modules.gototest/1 [1.0.1 200711261600]


    org.netbeans.modules.javahelp/1 [2.9.1 200711261600]


    org.netbeans.modules.jumpto/1 [1.3.1 200711261600]


    org.netbeans.modules.lexer.editorbridge/1 [1.4.1 200711261600]


    org.netbeans.modules.lexer.nbbridge/1 [1.2.1.1 200711261600]


    org.netbeans.modules.lexer/2 [1.25.1.1 1 200711261600]


    org.netbeans.modules.masterfs/1 [1.11.1 200711261600]


    org.netbeans.modules.options.api/1 [1.5.1 200711261600]


    org.netbeans.modules.options.editor/1 [1.4.1 200711261600]


    org.netbeans.modules.options.keymap [1.1.1 200711261600]


    org.netbeans.modules.progress.ui [1.0.1.0.0.1 080409]


    org.netbeans.modules.project.ant/1 [1.17.1 200711261600]


    org.netbeans.modules.project.libraries/1 [1.15.1 200711261600]


    org.netbeans.modules.projectapi/1 [1.13.1 200711261600]


    org.netbeans.modules.projectui [1.12.1.1.6 1 200711261600]


    org.netbeans.modules.projectuiapi/1 [1.24.1.6 6 200711261600]


    org.netbeans.modules.properties.syntax/1 [1.18.1 200711261600]


    org.netbeans.modules.properties/1 [1.21.1 200711261600]


    org.netbeans.modules.queries/1 [1.10.1 200711261600]


    org.netbeans.modules.schema2beans/1 [1.16.1 200711261600]


    org.netbeans.modules.sendopts/2 [2.1.1 200711261600]


    org.netbeans.modules.settings/1 [1.13.1 200711261600]


    org.netbeans.modules.utilities/1 [1.25.1 200711261600]


    org.netbeans.modules.web.flyingsaucer/1 [1.0.1 1 200711261600]


    org.netbeans.modules.xml.axi [1.2.1 200711261600]


    org.netbeans.modules.xml.catalog/2 [1.12.1.4.4 4 200711261600]


    org.netbeans.modules.xml.core/2 [1.13.1.4 4 200711261600]


    org.netbeans.modules.xml.lexer [1.1.1 200711261600]


    org.netbeans.modules.xml.retriever/1 [1.1.1 200711261600]


    org.netbeans.modules.xml.schema.completion [1.0.1 200711261600]


    org.netbeans.modules.xml.schema.model/1 [1.2.1 1 200711261600]


    org.netbeans.modules.xml.text/2 [1.13.1.4.4 4 200711261600]


    org.netbeans.modules.xml.xam/1 [1.2.1 1 200711261600]


    org.netbeans.spi.editor.hints/0 [1.2.1.5 5 200711261600]


    org.netbeans.spi.navigator/1 [1.5.1 200711261600]


    org.netbeans.swing.dirchooser [1.0.1 200711261600]


    org.netbeans.swing.plaf [1.6.1 200711261600]


    org.netbeans.swing.tabcontrol [1.9.1 200711261600]


    org.openide.actions [6.6.1.1 200711261600]


    org.openide.awt [6.11.1.1 200711261600]


    org.openide.compat [6.5.1 200711261600]


    org.openide.dialogs [7.5.1 200711261600]


    org.openide.execution [1.10.1 200711261600]


    org.openide.explorer [6.12.1 1 200711261600]


    org.openide.filesystems [7.3.1 200711261600]


    org.openide.io [1.11.1 200711261600]


    org.openide.loaders [6.7.1 200711261600]


    org.openide.modules [7.3.1 200711261600]


    org.openide.nodes [7.2.1.1 200711261600]


    org.openide.options [6.7.1 200711261600]


    org.openide.text [6.16.1 200711261600]


    org.openide.util [7.10.1.1 1 200711261600]


    org.openide.windows [6.18.1 200711261600]


    org.openidex.util/3 [3.13.1 200711261600]


    org.springframework/1 [2.5 081118]





Thanks,





HomerE

User e05b1833aa

14-03-2009 18:01:10

Hi,





The log file contains lots of warnings, so it's impossible for me to find the relevant one. Also, this file is really long, so I'm adding it as an attachment for your review.





Have a nice weekend,





HomerE

ChemAxon 3b366b17e5

14-03-2009 21:13:28

Update on Windows Vista is troublesome  if Instant Jchem is installed to "c:\Program Files" folder. Please install InstantJchem to different folder on disk (e.g. 'c:\InstantJChem")





Petr

ChemAxon fa971619eb

15-03-2009 08:28:50

The cause of this problem is that although IJC has been updated some of the older modules are still being used. This is a Vista releated problem (it does not happen on Wondows XP or other OSes).


More information about the problems can be found here:


http://www.chemaxon.com/instantjchem/installguide.html#windows





As mentioned the solution is to


1. uninstall


2. manually delete anything the uniunstaller does not delete:


- your userdir: C:\Users\evehom\AppData\Roaming\.instantjchem\ijc_2_4


- your installation dir: C:\Program Files\ChemAxon\InstantJChem


- Virtual File System files - C:\Users\evehom\AppData\Local\VirtualStore\Program Files\ChemAxon\InstantJChem


3. reinstall.





As mentioned, installing outside the normal C:\Program Files will help avoid this problem.





Alternatively, you can use the Java Web Start version which will avoid this problems.


http://www.chemaxon.com/instantjchem/ijc_latest/jws_stable.html





I hope this solves the problem.





Tim

User e05b1833aa

16-03-2009 12:29:39

Hi, I would like to run the JWS version (have done so successfully in the past) but can't get it to run (Vista again). When running the JWS link, I get the following error message and additional information:








Cannot run program





"\\SBS2008\RedirectedFolders\evehom\.instantjechem\ws_installation_www.chemaxon.com_stable/bin/instantjcehm.exe": CreateProcess error=2, The system cannot find the file specified








From the starting file tab:








<?xml version="1.0" encoding="UTF-8"?>


<jnlp spec="1.0+" codebase="http://www.chemaxon.com/instantjchem-jws/stable">


    <information>


<title>Instant JChem (JWS)</title>


<vendor>Chemaxon Kft.</vendor>


        <description>Instant JChem Java Web Start version</description>


        <description kind="short">Instant JChem</description>


        <homepage href="http://www.chemaxon.com/product/ijc.html"/>


        <shortcut online="true">


            <desktop/>


        <menu submenu="ChemAxon"/>


      </shortcut>


        <icon href="frame32.gif" kind="default"/>


        <offline-allowed/>


    </information>


    <security>


        <all-permissions/>


    </security>


    <resources>


        <j2se version="1.5+"/>


        <jar href="JNLPInstaller.jar" main="true" download="eager"/>


    </resources>


    <application-desc main-class="com.im.ijc.jnlpinstaller.Main">


    </application-desc>


</jnlp>








From the Exceptions tab:





java.io.IOException: Cannot run program "\\SBS2008\RedirectedFolders\evehom\.instantjchem\ws_installation_www.chemaxon.com_stable/bin/instantjchem.exe": CreateProcess error=2, The system cannot find the file specified


    at java.lang.ProcessBuilder.start(Unknown Source)


    at java.lang.Runtime.exec(Unknown Source)


    at java.lang.Runtime.exec(Unknown Source)


    at com.im.ijc.jnlpinstaller.Main.main(Main.java:304)


    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)


    at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)


    at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)


    at java.lang.reflect.Method.invoke(Unknown Source)


    at com.sun.javaws.Launcher.executeApplication(Unknown Source)


    at com.sun.javaws.Launcher.executeMainClass(Unknown Source)


    at com.sun.javaws.Launcher.doLaunchApp(Unknown Source)


    at com.sun.javaws.Launcher.run(Unknown Source)


    at java.lang.Thread.run(Unknown Source)


Caused by: java.io.IOException: CreateProcess error=2, The system cannot find the file specified


    at java.lang.ProcessImpl.create(Native Method)


    at java.lang.ProcessImpl.(Unknown Source)


    at java.lang.ProcessImpl.start(Unknown Source)


    ... 13 more








Under Control Panel/Programs and Features there is still an entry for InstantJchem JWS, but I cannot uninstall this for some reason.





Regards,





HomerE

User 596f3ef229

17-03-2009 06:43:23

you can remove JWS by opening your java control panel, in the "temporary internet files" area click "settings", then on the next window click "delete files" then "OK". Should remove your IJC JWS icon too.





It does not clear your chemaxon project directories (I think from memory).

User e05b1833aa

17-03-2009 07:12:12

Hi,





My IJC JWS icon was removed from the list of installed programs, but I still can't install the JWS version. It downloads, and then asks to upgrade immediately. After that, it comes with the same error messages again...

User 596f3ef229

17-03-2009 07:21:47

are you using your own JWS server or the chemaxon server?

ChemAxon fa971619eb

17-03-2009 07:24:44

We are investigating this problem.


We think it is due to the home directory being specifeid using a UNC rather than a mapped drive (e.g. C:), but we are still investigating.





Tim

User e05b1833aa

17-03-2009 07:26:47

I'm using your server.

ChemAxon fa971619eb

15-05-2009 08:56:06

Hopefully the problems of using files using UNC notation has now been fixed in the IJC 2.5 release.


Tim