User e29a5e272b
19-05-2008 12:02:27
Hi,
New 2.3 version of IJChem does not recognise fields (but structure field) in a sdf file. Previous 2.1 version (installed at the same compouter) read this sdf file like a charm.
What could it be?
Thanks in advance
Dmytro
ChemAxon fa971619eb
19-05-2008 12:21:25
Can you provide us with a few records of the SD file so that we can examine this?
(if necessary send privately by mail to
tdudgeon _at_ chemaxon.com)
Tim
ChemAxon fa971619eb
19-05-2008 13:01:56
Thanks you we are investigating it.
Its probably something wrong with the format of the SD file, but we need to find out what.
Tim
User e29a5e272b
26-05-2008 07:58:08
Tim,
Do you have any good news?
Otherwise it seemsworth to switch back to older version I used (2.1)
Dmytro
ChemAxon fa971619eb
26-05-2008 08:15:42
The problem is with the recognition of the structure format. The line:
-- StrEd --
is causing the format to be incorrectly recognised.
We are fixing this problem.
In the meantime if you replace all instances of this text with something more standard e.g. "-ISIS-" then the file seems to import OK.
Tim
User e29a5e272b
27-05-2008 15:12:25
Tim,
Thanks!
sed -i 's/--\ StrEd\ --/2D/g' en804WDL_627286.sdf
and I am in game
BTW. Some time ago I requested a feature that allow to perform lists logical operations using custom field like "idnumber" in example. sdf file. Have you implemented it?
With kind regards,
Dima
ChemAxon fa971619eb
28-05-2008 08:01:16
We have this on the plans, but it is not yet impmented.
Tim