export structure picture

User 72a5707b7d

14-02-2014 08:27:49


I disposed 30000 compounds in IJC。

I want to export all those structures as picture and name each picture with one of it cooperation field  one- time

Is there any method ?

Thanks and best regards,

ChemAxon 2bdd02d1e5

07-03-2014 07:57:51

Hi, I'm sorry for the late response, your post got buried unfortunately.

Yes there is a method for this. You will need to use Groovy script. Please follow up to this blog post http://www.chemaxon.com/blog/batch-exporting-binary-files-e-g-images/

Best regards...

User 72a5707b7d

29-01-2015 23:55:10

Dear Pilip

Thanks very much for your helo

But this method only exporting binary files ,

I want to export the structures picture to a folder.



Best regards,


User 72a5707b7d

30-01-2015 02:27:39


I want to export the structures as a 200*200 monochrome png picture to a folder.


Best regards,


ChemAxon 26d92e5dcd

05-02-2015 16:40:46

Dear Huang,

the script that was mentioned in the blogpost is will work only for binary fields and will not work for structures.

The structure itself can be exported as an image. The script will have to be modified to export from structure field, while using export parameters such as those. Please also refer to the IJC API documentation and the SDF exported script example, which you could modify to your needs of exporting to an image. 


All the best