User 870ab5b546
30-07-2012 19:48:45
JChem 5.10 reports the basic pKa of [N-]=[N+]=[N-] to be 19.8. The correct value is 4.7.
JChem 5.10 reports the basic pKa of [N--][N+]#N to be 17.8. Because this compound is identical to the previous one, its pKa should also be 4.7. There is no reason why these two resonance structures of the same compound should give different pKa values.
User 870ab5b546
03-08-2012 17:44:56
Hi, when will this bug be fixed?
User 851ac690a0
06-08-2012 10:54:54
Hi,
The fix will be available in the 5.11 version in September.
Jozsi
User 870ab5b546
10-08-2012 19:08:04
Here are some related errors.
For hydrazoic acid N=[N+]=[N-], JChem reports a basic pKa of 17.8 for N1. N1 is an acidic atom with an acidic pKa of 4.7. I don't know what its basic pKa is, but it is very low.
Likewise, for methyl azide CN=[N+]=[N-], JChem reports a basic pKa of 19.2 for N2. I don't know what its basic pKa is, but it is very low.
User 851ac690a0
10-08-2012 19:26:31
Hi,
Yes , there are problems.
I read that the "N=[N+]=[N-]" is protonable in super acids. Its basic pKa is about -10. (I guess)
the "CN=[N+]=[N-]" is "more" basic its pKa is about -6.0. (just a guess)
Plotting of the "pH - species %" also incorrrect in Marvin.
Jozsi
User 870ab5b546
10-08-2012 20:18:27
Jozsi wrote: |
Hi,
Yes , there are problems.
I read that the "N=[N+]=[N-]" is protonable in super acids. Its basic pKa is about -10. (I guess)
the "CN=[N+]=[N-]" is "more" basic its pKa is about -6.0. (just a guess)
Plotting of the "pH - species %" also incorrrect in Marvin.
Jozsi
|
I'm not too concerned about the accuracy of the very negative pKb values, as long as they are in the ballpark, not around 17-19. I'm also very concerned that no acidic pKa value is given for HN3.
User 870ab5b546
15-01-2013 17:55:40
These bugs appear to be fixed by JChem 5.11.5. Thanks.