Syntax Error in evaluate match

Whilst trying the evaluate tool in version 5_1_01 on RedHat WS 4, 64 bit version, I encountered a problem with the match function. Here is the output from a typical example:

Code:

108% evaluate -e "match('[O,S;H1]')" aroms.smiles Exception in thread "main" chemaxon.nfunk.jep.ParseException: Error while compiling expression: match('[O,S;H1]')     Syntax Error (implicit multiplication not enabled)         at chemaxon.nfunk.jep.JEP.parseExpression(Unknown Source)         at chemaxon.jep.ChemJEP.compile(Unknown Source)         at chemaxon.jep.Evaluator.compile(Unknown Source)         at chemaxon.jep.Evaluator.compile(Unknown Source)         at chemaxon.jep.Evaluator.main(Unknown Source) Caused by: chemaxon.nfunk.jep.ParseException: Syntax Error (implicit multiplication not enabled)         at chemaxon.nfunk.jep.Parser.MultiplicativeExpression(Unknown Source)         at chemaxon.nfunk.jep.Parser.AdditiveExpression(Unknown Source)         at chemaxon.nfunk.jep.Parser.RelationalExpression(Unknown Source)         at chemaxon.nfunk.jep.Parser.EqualExpression(Unknown Source)         at chemaxon.nfunk.jep.Parser.AndExpression(Unknown Source)         at chemaxon.nfunk.jep.Parser.OrExpression(Unknown Source)         at chemaxon.nfunk.jep.Parser.MultipleExpression(Unknown Source)         at chemaxon.nfunk.jep.Parser.Expression(Unknown Source)         at chemaxon.nfunk.jep.Parser.Start(Unknown Source)         at chemaxon.nfunk.jep.Parser.parseStream(Unknown Source)         at chemaxon.nfunk.jep.JEP.parseExpression(Unknown Source)         at chemaxon.jep.ChemJEP.compile(Unknown Source)         at chemaxon.jep.Evaluator.compile(Unknown Source)         at chemaxon.jep.Evaluator.compile(Unknown Source)         at chemaxon.jep.Evaluator.main(Unknown Source) 109%

We are using jrel.6.0_07 for java, and the initial tests from evaluate except this version.





I would like to use this new tool. Is this a bug or a configuration issue with our environment?

Do you use JChem 5.1.1 package, or Marvin 5.1.1? Match functions only work in JChem.





Zsolt

yep Marvin 5.1.1!





Is there any plan to introduce it into Marvin?





Thanks

We will release a software package called "Structure search extension for Marvin"; it will contain the classes from JChem that are required to use the match Chemical Terms function.





Zsolt