I am quite a newbie in Java & ChemAxon. What I've tried to do is to integrate BemisMurckoPlugin into cxcalc, following the instructions found here: https://www.chemaxon.com/marvin/examples/plugin-integration/index.html
However, after the last step, when running:
cxcalc bemismurcko testmols.sdf
I obtain the following error: "Calculation name is not found"
Other calculations from cxcalc work fine.
What can be the problem?
Thanks in advance for help!
Thank you, but the problem seems to be not in calc.properties file.
If change directory to ./MarvinBeans/bin and launch plugin like:
cxcalc bemismurcko -h
it is possible to get acces to help part of calc.properties file.
However, the calculation itself doesn't launch, throwing an error:
Sorry for the late answer. I have checked the tutorial.
The example JAR files (BemisMurckoPlugin.jar) on the website and in the MarvinBeans/examples directory are wrong.
Please, try to use the attached file.
If you are interested in an easier way to integrate third-party calculations, visit the following site:
Thank you very much indeed for your help!
However, I'm still getting an error, which is Unsupported Class Version Error.
There is JRE v 1.7 installed on my computer. Are there any problems with compatibility?
The previous attached JAR file is compiled using Java 1.7. If your MarvinBeans/bin/java.ini file describes a Java 1.6 location, you get the mentioned exception.
I attached the recompiled JAR (Java 1.6). Try to use it or change the path to your JRE 1.7 location in java.ini file.
Thank you very much, everything is working now! Changing of .ini file worked for me as well.