User 30ebce914a
28-12-2010 16:09:19
hi all,
i want to convert smiles and sdf notations to pdb files please let me know the way.i tried with smiles online translator but i did not get please let me know if any one has idea
User 30ebce914a
28-12-2010 16:09:19
hi all,
i want to convert smiles and sdf notations to pdb files please let me know the way.i tried with smiles online translator but i did not get please let me know if any one has idea
ChemAxon 0a9e2a55e1
28-12-2010 19:06:05
Hi,
If You want to convert one or only a few molecules, You can use any one of our applet examples
http://www.chemaxon.com/marvin/examples/applets/sketch/embed.html
Just paste the smiles and sdf You want to convert, and open the Edit/Sorce menu, then in the View menu select PDB.
If you want to convert more molecules, please intall our MarvinBeans application
http://www.chemaxon.com/download/marvin/for-end-users/
Then use the command line molconvert program, to convert Your file containg the smiles or sdf:
molconvert pdb input_file_name
More information about molconvert tool, and the available options:
http://www.chemaxon.com/marvin/help/applications/molconvert.html
Best regards,
Peter