Mview 4.1.11 issues with PubChem sdf.gz files

User 677b9c22ff

17-08-2007 22:28:38

Hi,

I was scrolling (fast and furious) through some of the pubchem files

ftp://ftp.ncbi.nlm.nih.gov/pubchem/Compound/CURRENT-Full/SDF

and got an error during

the process. See the attached file and the error

Marvin View version 4.1.11

Tobias

Exception in thread "Thread-17" java.lang.StackOverflowError

at java.io.ObjectStreamClass.lookup(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:234)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CNode.writeObject(CNode.java:378)

at sun.reflect.GeneratedMethodAccessor13.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)

at java.io.ObjectOutputStream.writeSerialData(Unknown Source)

at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)

at java.io.ObjectOutputStream.writeObject0(Unknown Source)

at java.io.ObjectOutputStream.writeObject(Unknown Source)

at chemaxon.struc.CEdge.writeObject(CEdge.java:233)

at sun.reflect.GeneratedMethodAccessor14.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)

at java.lang.reflect.Method.invoke(Unknown Source)

at java.io.ObjectStreamClass.invok

ChemAxon 7c2d26e5cf

22-08-2007 09:36:16

Can you give some information your hardware and software environment (to check this issue)?

- operating system

- java version

- CPU type

- memory size

User 677b9c22ff

22-08-2007 19:02:32

Hi,

MarvinView/Swing 4.1.11

JVM: Sun Microsystems Inc. Java 1.5.0_09

OS: x86 Windows XP 5.1

Running environment: Application

Memory: 198.5M maximum, 7.7M total, 0.8M free

------------------------------------------------

Maybe its the memory, because the files are like 60 MB each.

Tobias

ChemAxon 7c2d26e5cf

24-08-2007 15:07:58

Which type of processor (CPU) is in your machine? (Pentium 4, Pentium D, Core Duo or Core 2 Duo)

User 677b9c22ff

24-08-2007 18:35:43

Hi,

1) a Core Duo - 2 GHz with 2 GByte RAM WIN32XP

2) a Dual Opteron - 2.8 GHz with 2.88 GByte RAM WIN32XP

Tobias

ChemAxon 7c2d26e5cf

29-08-2007 17:18:51

Thanks for the info. We will check it.

User 677b9c22ff

30-08-2007 06:04:04

Tamas,

I need to add, I enabled a 8x8 matrix (rows x columns) but I forgot which file it was. I tried it on the Core Duo 2.0 GHz (which has almost the same ALU speed like the Opteron 2.8 GHz, but I could not crash Marvin View (not that I want to - I am so grateful for this application especially for the development of new metabolomics approaches you need it every day hundred times).

But, I remember that on the Dual Opteron 2.8 GHz (which has a memory speed of almost 10 GByte/second) I can scroll through the 25,000 compounds in a 8x8 matrix in almost realtime with no delay. So maybe it has something to do with that. Maybe its not an important error, who is scrolling around in molecule files like crazy anyway....

Tobias

User f359e526a1

30-08-2007 09:38:32

I also tried with my ancient laptop using a 8x8 cell and could not manage to reproduce the error. Still, if you find it again, please provide the example file so we can test it again.