Display chiral label in images?

Hi,


Is there an image export option equivalent to the applet's chiralitySupport parameter? I'd like images generated from MOL files to show chirality labels.


Thanks, and have a good weekend everyone ;)

YoavShapira wrote:

Hi, Is there an image export option equivalent to the applet's chiralitySupport parameter? I'd like images generated from MOL files to show chirality labels. Thanks, and have a good weekend everyone ;)

There is no option in image export for setting the visibility of R/S labels. Now, I am checking how to solve this problem.

There is no way to display chirality labels in image export in the current Marvin release but we will implement this feature.

Hi,





I am wondering if this feature has been implemented yet? I am looking for a way to have generated PNG images contain a Chiral label if the molfile indicates that the compound has the MDL chiral flag set (i.e. if the 5th token of the counts line is set to 1).





Thank you for any help you can provide.

Code:

molconvert jpeg:chiral_selected chiral.mrv -o chiral.jpeg

See Image export options (chiral_off, chiral_selected, chiral_all).

Thank you. I also tried molecule.toBinFormat ("png:chiral_selected"), and that worked too. Thanks!