load the struct not the file

Hi there





Well i'm trying to load a web page with the marvinsketch, i do a structure search and everything goes smooth. The problem is that then i have to return to the form with the molecule loaded on it. I have the string that marvinsketch created but cannot load on it.





Do I have to create a file with that string in order to load it as in the example?


There is not a way to load straight the string?





Thanks Ignasi

Please see the following example.


http://www.chemaxon.com/marvin/doc/dev/example-sketch3.2.html


It demonstrates how to load molecule string in the MarvinSketch applet.

and this kind cannot load?





<?xml version="1.0" ?>


<MDocument>


<MChemicalStruct>


<molecule molID="m1">


<atomArray


atomID="a1 a2 a3 a4 a5 a6"


elementType="C C C C C C"


x2="-2.2750000953674316 -3.60866943641569 -3.60866943641569 -2.2750000953674316 -0.9413307543191731 -0.9413307543191731"


y2="1.8317005378506401 1.0616835972915997 -0.47835028382648126 -1.2483672243855217 -0.47835028382648126 1.0616835972915997"


/>


<bondArray>


<bond atomRefs2="a1 a2" order="1" />


<bond atomRefs2="a1 a6" order="1" />


<bond atomRefs2="a2 a3" order="2" />


<bond atomRefs2="a3 a4" order="1" />


<bond atomRefs2="a4 a5" order="1" />


<bond atomRefs2="a5 a6" order="2" />


</bondArray>


</molecule>


</MChemicalStruct>


</MDocument>

You have to encode special characters for JavaScript: ' (single quote), " (double quotes), \ (backslash) and \n (end of line).


I have attached a JSP example which demonstrates how to convert these characters.


The converter method (from the example) is copied here:

Code:

static String replaceString(String input, String query, String replacement) {    StringBuffer sb = new StringBuffer();    int from=0;    int pos;    while((pos = input.indexOf(query, from)) >= 0) {        if(pos > from) {          sb.append(input.substring(from,pos));        }        sb.append(replacement);        from = pos+query.length();    }    if(input.length() > from)        sb.append(input.substring(from,input.length()));    return sb.toString(); } public static String convertForJavaScript(String input) {     String value = input;     //Converting Windows style string to UNIX style     value = replaceString(value, "\r\n", "\n");     //Converting Macintosh style string to UNIX style     value = replaceString(value, "\r", "\n");     //Converting special characters     value = replaceString(value, "\\", "\\\\");     value = replaceString(value, "\n", "\\n");     value = replaceString(value, "\"", "\\\"");     value = replaceString(value, "'", "\\'");     return value; }

Thank you very much with the example and your translate solution it has been easy.





You have a really A++ service with this forum to help developers.