coordinate bonds don't display in Word

User 870ab5b546

04-01-2016 19:15:16

This structure:


<?xml version="1.0" encoding="MacRoman"?>
<cml xmlns="http://www.chemaxon.com" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.chemaxon.com/marvin/schema/mrvSchema_14_12_01.xsd" version="ChemAxon file format v14.12.01, generated by v15.8.10.0">
<MDocument>
<MChemicalStruct>
<molecule molID="m1">
<atomArray>
<atom id="a1" elementType="C" x2="-21.707369100419506" y2="9.688202352885455"/>
<atom id="a2" elementType="C" x2="-23.145070859358828" y2="9.136284195598737"/>
<atom id="a3" elementType="C" x2="-23.064475830551576" y2="7.598477743086239"/>
<atom id="a4" elementType="N" x2="-21.576942501377903" y2="7.199894388819775"/>
<atom id="a5" elementType="C" x2="-20.738241932755834" y2="8.491376328395598"/>
<atom id="a6" elementType="O" x2="-21.308787770961622" y2="11.175728125370618"/>
<atom id="a7" elementType="C" x2="-19.200351513510817" y2="8.571955844368206"/>
<atom id="a8" elementType="R" sgroupRef="sg1" x2="-21.025056795002264" y2="5.762180172746824"/>
<atom id="a9" elementType="H" x2="-19.839450103050474" y2="9.790545783462356"/>
<atom id="a10" elementType="O" x2="-18.430351513510814" y2="9.905634966196242"/>
<atom id="a11" elementType="R" sgroupRef="sg2" x2="-18.395711346951560" y2="7.258885319849629"/>
<atom id="a12" elementType="Na" formalCharge="1" x2="-19.434855619023400" y2="11.554168939071413"/>
</atomArray>
<bondArray>
<bond id="b1" atomRefs2="a1 a2" order="1"/>
<bond id="b2" atomRefs2="a2 a3" order="1"/>
<bond id="b3" atomRefs2="a3 a4" order="1"/>
<bond id="b4" atomRefs2="a1 a5" order="1"/>
<bond id="b5" atomRefs2="a4 a5" order="1"/>
<bond id="b6" atomRefs2="a1 a6" order="2"/>
<bond id="b7" atomRefs2="a5 a7" order="1"/>
<bond id="b8" atomRefs2="a4 a8" order="1"/>
<bond id="b9" atomRefs2="a5 a9" order="1"/>
<bond id="b10" atomRefs2="a7 a10" order="2"/>
<bond id="b11" atomRefs2="a7 a11" order="1"/>
<bond id="b12" atomRefs2="a6 a12" convention="cxn:coord"/>
<bond id="b13" atomRefs2="a10 a12" convention="cxn:coord"/>
</bondArray>
<molecule id="sg1" role="SuperatomSgroup" title="CO2tBu" leftName="tBuO2C" molID="m2">
<atomArray atomID="a13 a14 a15 a16 a17 a18 a19" elementType="C C C C O C O" attachmentPoint="1 0 0 0 0 0 0" sgroupAttachmentPoint="1 0 0 0 0 0 0" x2="-21.751938481887215 -21.33467000694947 -22.772384223022414 -19.896955790876518 -20.782784300573827 -21.886555713325112 -21.20005277551157" y2="10.314019692465347 12.948538058281596 12.396652351905953 13.500423764657235 11.51082384220864 14.386252274354547 8.876305476392393"/>
<bondArray>
<bond id="b14" atomRefs2="a18 a14" order="1"/>
<bond id="b15" atomRefs2="a14 a15" order="1"/>
<bond id="b16" atomRefs2="a14 a16" order="1"/>
<bond id="b17" atomRefs2="a14 a17" order="1"/>
<bond id="b18" atomRefs2="a17 a13" order="1"/>
<bond id="b19" atomRefs2="a13 a19" order="2"/>
</bondArray>
<SgroupAtom>
<scalar title="graphicalMarvinProperty::FormattedLabel" convention="atomprop" dataType="xsd:string">CO2\i\St\nBu</scalar>
<scalar title="graphicalMarvinProperty::FormattedLeftLabel" convention="atomprop" dataType="xsd:string">\i\St\nBuO\s2\nC</scalar>
</SgroupAtom>
<AttachmentPointArray>
<attachmentPoint atom="a13" order="1" bond="b8"/>
</AttachmentPointArray>
</molecule>
<molecule id="sg2" role="SuperatomSgroup" title="tBuO" rightName="OtBu" molID="m3">
<atomArray atomID="a20 a21 a22 a23 a24" elementType="O C C C C" attachmentPoint="1 0 0 0 0" sgroupAttachmentPoint="1 0 0 0 0" x2="-10.77328130465802 -9.968641138098764 -8.655570613580185 -9.164000971539508 -11.281711662617344" y2="-22.708247636859642 -24.021318161378222 -23.216677994818966 -25.3343886858968 -24.825958327937478"/>
<bondArray>
<bond id="b20" atomRefs2="a24 a21" order="1"/>
<bond id="b21" atomRefs2="a21 a22" order="1"/>
<bond id="b22" atomRefs2="a21 a23" order="1"/>
<bond id="b23" atomRefs2="a21 a20" order="1"/>
</bondArray>
<SgroupAtom>
<scalar title="graphicalMarvinProperty::FormattedLabel" convention="atomprop" dataType="xsd:string">\i\St\nBuO</scalar>
<scalar title="graphicalMarvinProperty::FormattedRightLabel" convention="atomprop" dataType="xsd:string">O\i\St \nBu</scalar>
</SgroupAtom>
<AttachmentPointArray>
<attachmentPoint atom="a20" order="1" bond="b11"/>
</AttachmentPointArray>
</molecule>
</molecule>
</MChemicalStruct>
</MDocument>
</cml>

when copied from MarvinSketch 15.8.10 and pasted into MS Word, gives the image below. Note that the coordinate bonds are displayed as regular single bonds.

ChemAxon cbb451ac1e

05-01-2016 09:41:04

Hello,


Are you on Windows or Mac?


Also, can you please try a more recent version? Thanks!


Best,


Krisztian

User 870ab5b546

05-01-2016 18:13:47

I'm using a Mac, Word 2011 version 14.5.9. I upgraded to MarvinSketch 15.12.14. Now I can't paste any MarvinSketch structure into Word! I get an error message, "There is not enough memory or disk space to complete the operation." I can paste a PNG or text. I went back to MarvinSketch 15.4.27, and I can paste a structure from it into Word, although again, the coordinate bond appears as a regular single bond. 

ChemAxon cbb451ac1e

07-01-2016 13:04:46

Hello,


We could reproduce the problem. Sorry for the inconvenience. We'll fix this, and update you once done. 


Best,


Krisztian

User 870ab5b546

07-01-2016 14:14:39

There are actually two problems here. The new one, where I can't paste anything into Word, and the old one, where coordinate bonds appear as single bonds. Please fix both. Köszönöm.


Edit: As of Jan 13, 2016, I am able to paste Marvin pictures into Word. I don't know why it is now working or why it wasn't working previously. But the problem of the coordinate bond appearing as a regular single bond remains.

ChemAxon cbb451ac1e

14-01-2016 09:58:34

Happy to let you know that the issue of keeping the coordinate bonds in Word has been fixed, and will be available with the next week's release.