MarvinSketch and its zealous cropping

User e3f03c303b

02-10-2014 23:03:24

Hi, I've noticed that whenever a primary/secondary amine group occurs near to the top of a structure the hydrogen in the amine gets cut off. For example see the attached structure of fluoxetine. How would I overcome this problem? 

ChemAxon 5693b0ec15

03-10-2014 08:30:09

Hi,


thank you for your feed-back.


Unfortunately I can not reproduce the problem using default parameters.


Could you specify your settings used for image export?


 


Best regards,


Nikolett Mihala

User e3f03c303b

03-10-2014 10:13:31

I use a scale of 112 and an alpha channel (set to transparent). 

ChemAxon 7936325a45

06-10-2014 08:34:46

Hi,


I still could not reproduce this error. Can you specify your Marvin version?


Thanks,
István 

User e3f03c303b

06-10-2014 08:55:17

Version: 14.9.29.0


All settings have been set according to this Wikipedia chemistry drawing guide [1]. Aside from the down wedge setting which I have set to default. 

ChemAxon 7936325a45

06-10-2014 09:18:16

Thank you, that helped. I created a ticket in our issue tracking system. We will inform you in this forum topic when the fix is done.

Regards,
István 


 

ChemAxon f052bdfe3c

20-11-2014 09:32:35

The 14.11.24. release will contain the fix.


Best regards,


Efi