Bond Length in Drawings

Hi there,

Happy new year to you!

I have had a request from our users of the Marvin applet.  In the Document Style settlings, format of the current document (see screen grab attached) .  When you select Apply changes for all atoms and bonds, you have the option of setting

Bond length:

Scale by        Median Bond

 

Our users would like to be able to do this when Apply changes for default atoms/bonds is selected, currently when this option is selected the Bond length options are disabled.  They would like it be set auctomatically in the applet on opening.  I would also need to to apply these settings on export using a format string such as:

 

               String formatString = ",atsiz0.6,"
                        + "atomFont:Times New Roman-PLAIN-12,"
                        + "bondw0.125,"
                        + "wireThickness0.055,"
                        + "stickThickness0.07,"
                        + "ballRadius0.35,"
                        + "H_hetero,"
                        + "anybond_solid,"
                        + "cv_inChain,"
                        + "#ffffff,"
                        + "ligandOrderVisibility_withDef,"
                        + "mono,"
                        + "aprop,"
                        + "downwedge_mdl,"
                        + "coordBondStyle_solid,"
                        + "coordBondStyleAtMulticenter_solid,"
                        +"lp,"
                        + "wireframe";

 

byte[] moldata = MolExporter.exportToBinFormat(doc, "png:"+ formatString);

 

Is this possible to achieve?

 

Thanks

Megan

Hi Megan,

Unfortunately, because of the way how this feature was originally implemented, we cannot fulfill this request in the near future. I created a task about it in our issue tracking system, and when this part of the program will be refactored, we will reconsider it.

Best Regards,

Efi

Hi Efi,

Is it possible for you to LOAD a style that is user specific, so bond length can be changed to that requested by Megan?

Thanks

Trupti

Unfortunately, it is not posible. This information is not saved in style.

Best Regards,

Efi