m_view error displaying cdx; java.lang.NullPointerException

I have one particular cdx(binary) string that causes an error popup using MarvinView.  Unfortunately, I cannot include that proprietary molecule's cdx string here.  The applet works fine for many other cdx inputs.  I also tried using mview_param("onError", ""); and mview_param("alertError", false); to catch the error, but this did not change the error popup.

<script>
            var width = 800;
            var height = 300;
            mview_name = "MView";
            mview_begin("/marvin", width, height);
            mview_param("border", "1");
            mview_param("mol", form1.cdx.value);
            mview_param("molFormat", "cdx");
            mview_end();
</script>

Versions:

Product Version:
MarvinView 5.12.0
Build Date:
2013-03-05
Internal build id:
5.12.0_b79
Operating System:
x86 Windows 7 6.1
Java:
Oracle Corporation Java 1.7.0_17

  The popup error and stack trace:

ERROR:
Molfile cannot be loaded because an error occured:
java.lang.NullPointerException

#ffffffffffffffff

STACK TRACE:
java.lang.NullPointerException
    at chemaxon.marvin.io.formats.cdx.CDXObjectReader.a(Unknown Source)
    at chemaxon.marvin.io.formats.cdx.CDXObjectReader.readMol(Unknown Source)
    at chemaxon.marvin.io.formats.cdx.CDXObjectReader.readDocument(Unknown Source)
    at chemaxon.marvin.io.formats.cdx.CDXImport.readDocument(Unknown Source)
    at chemaxon.marvin.io.MRecordImporter.b(Unknown Source)
    at chemaxon.marvin.io.MRecordImporter.a(Unknown Source)
    at chemaxon.marvin.io.MRecordImporter.b(Unknown Source)
    at chemaxon.marvin.io.MRecordImporter.readDoc(Unknown Source)
    at chemaxon.marvin.util.MolLoader.a(Unknown Source)
    at chemaxon.marvin.util.MolLoader.run(Unknown Source)
    at chemaxon.marvin.common.swing.MolPanel.startLoader(Unknown Source)
    at chemaxon.marvin.view.swing.ViewPanel.startstop(Unknown Source)
    at chemaxon.marvin.applet.AbstractMarvinApplet$3.run(Unknown Source)
    at java.awt.event.InvocationEvent.dispatch(Unknown Source)
    at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
    at java.awt.EventQueue.access$200(Unknown Source)
    at java.awt.EventQueue$3.run(Unknown Source)
    at java.awt.EventQueue$3.run(Unknown Source)
    at java.security.AccessController.doPrivileged(Native Method)
    at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
    at java.awt.EventQueue.dispatchEvent(Unknown Source)
    at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
    at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
    at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
    at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
    at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
    at java.awt.EventDispatchThread.run(Unknown Source)

Dear tjodonell!

   Unfortunatelly the onError, and allertError parameters can only set  what to do in JavaScript side, after the error has happenned, and was displayed by us.  There is no parameter that you can set disable error display. If you want to, tah contact with [email protected] to get access to our secure FTP server. Through this you can share the problematic CDX file with us, and we can solve your issue. For further informations contact [email protected].

Regards:
Balázs 

Hi, 

 

Unfortunately I can't even guess what causes the problem.

Is it possible to open the file in ChemDraw, delete some parts of it then save it as cdx and try to open it again in Marvin?

We have some problems with graphical objects and formatted textboxes.

We're sorry for the inconvenience.

Best regards,

Peter