How to display Aromatic form of a structure in MarvinJS

User 8139ea8dbd

15-12-2015 00:41:57

Was able to do that with Marvin Applet using Structure > Aromatic Form to switch between aromatic form and Kekule form. Thanks

ChemAxon 76c88f5366

16-12-2015 08:28:22

Hi, 


This feature has not been implemented in Marvin JS, yet. 


You can only indicate aromatic bonds in Marvin JS by selecting the 'aromatic bond' from the Bonds combo-box.


Best regards, 
Eszter 

ChemAxon 76c88f5366

18-12-2015 11:13:53

Hi,


If you would like to export the structure in aromatic form, there is another option:


Call molExport web service with the parameter "file format:a" for example :


{  "structure" : "benzene",


"parameters" : "mrv:a" } 


You can read more about this in the JChem web services API documentation here: https://restdemo.chemaxon.com/apidocs/#molExport .


I hope this will help.


Best regards,
Eszter 

User 8139ea8dbd

18-12-2015 15:28:41

Great information, thanks!  If Marvin JS could consider add a tool button to do aromatization (two rules, ChemAxon and Daylight) and dearomatization, it will be even better, so each developer does not have to reimplement this for their own company.  Thanks!

ChemAxon f052bdfe3c

18-12-2015 17:19:13

Thanks for your answer. I put it into our backlog.


Best regards,


Efi