User d943da6ca7
29-06-2010 09:36:36
We are glad to tell you that we just released new version of JChemExtensions.
Please visit our page and try new JChemExtensions. Of course, Marvin Family Nodes user can get new version free of charge!! 
https://www.infocom.co.jp/bio/develop/jchemextension_en.html
[1. New Features and improvements]
Marvin/JChem 5.3.4 are used.
[ 2. New Nodes]
| New Nodes | Description |
| JChemDelete | Deleting structure tables of relational databases. |
| DocumentExtractor | Extracts chemical names from text documents and converts them to chemical structures. |
| Variable Based MolImporter | Molecule file importer from variable locations. |
| Variable Based PdbImporter | Imports biochemical data from PDB file from variable locations. |
| GetMolNameAndComment | Get molecule name and comment. |
| SetMolNameAndComment | Set molecule name and comment. |
| Metabolizer | Metabolizer enumerates all the possible metabolites of a given substrate and predicts the major metabolites and estimates metabolic stability. |
| JChem External Tool | Allows running an external program on the data. |
[ 3.Improvements ]
| Nodes | Description |
| Calculator Plugins | Modifies GUI and features based on JChem/Marvin updating. |
| MrvToSmilesConverter | Adds export options. |
| MrvToCmlConverter | Adds export options. |
| JChemManager | Supports to create and connect local database (File system database). The method of connecting DB is simplified. |
| JChemCartridge | The method of connecting DB is simplified. |
| Reactor | Adds Keep properties of reactants options. Ratio of the reactants can be set for Reactor. Reactor supports a new output type: fused reaction output. |
| R-group Decomposition | Adds outputs Markush structure options. |
| MarvinView | Supports Color Attribute of Color Manager node (From Menu:View > Show Color Information). |
| All nodes | Improved error reporting. |
[ 4.Bug fixes ]
| Nodes | Description |
| JChemSearch | The fetch speed slows if a huge results are gotten. |
| MarvinSketch | Some shortcut keys are invalid. |
| MarvinView | The index 0 record is highlighted in some case. |