distance between atoms? angles? dihedral angles?

User 870ab5b546

30-01-2017 17:47:12

Hello, is there a simple way in MarvinSketch to calculate the distance between two atoms in a 3D structure? How about to measure a dihedral angle of two atoms about a bond? 

ChemAxon cfb2ce1d3d

31-01-2017 09:35:39










bobgr wrote:

Hello, is there a simple way in MarvinSketch to calculate the distance between two atoms in a 3D structure? How about to measure a dihedral angle of two atoms about a bond? 



Hello,


In MarvinSketch application there is no way to get this information, but using MS API it is possible.


Let me know if you are interested in the latter.


 


Kind regards


Zsolt

User 870ab5b546

31-01-2017 15:26:07

I've already figured out how to do it with the API, and I can add a button to MarvinJS that shows the distance or angle in a popup window. But I really encourage you to add such a feature to desktop MarvinSketch GUI as well. Now that you have discontinued MarvinSpace, it's a serious deficiency not to have such a feature. 

ChemAxon cfb2ce1d3d

31-01-2017 15:33:26










bobgr wrote:

I've already figured out how to do it with the API, and I can add a button to MarvinJS that shows the distance or angle in a popup window. But I really encourage you to add such a feature to desktop MarvinSketch GUI as well. Now that you have discontinued MarvinSpace, it's a serious deficiency not to have such a feature. 



Thanks for your comments. I am going to make a ticket out of this request.


Kind regards


Zsolt

User 870ab5b546

02-02-2017 15:03:50

It would be ideal to update the dihedral angle measurement as the user uses the Group Rotation feature to rotate around a bond. That way, the user can easily set the dihedral angle to a desired value.